PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aco026741.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Bromeliaceae; Ananas
Family WRKY
Protein Properties Length: 402aa    MW: 43503.4 Da    PI: 5.1741
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aco026741.1genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY986.2e-31205263259
                  --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
         WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                  +D ++WrKYGqK++kgs++pr+YYrC+s+ gC+++k+vers++dp++++itY++eHnh+
  Aco026741.1 205 SDLWAWRKYGQKPIKGSPYPRGYYRCSSSkGCSARKQVERSRTDPNMLVITYTSEHNHP 263
                  699************************998****************************7 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5081132.81199265IPR003657WRKY domain
Gene3DG3DSA:2.20.25.809.5E-31202265IPR003657WRKY domain
SuperFamilySSF1182902.88E-26203265IPR003657WRKY domain
SMARTSM007741.4E-37204264IPR003657WRKY domain
PfamPF031068.1E-26206263IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 402 aa     Download sequence    Send to blast
MCDSFWQRME ADQRGDLADI VRAGGLTTTP SPEFLLTSCG PMPSFRTSSS STDADRPMNN  60
FGDPFANLGD PLLNKSTGTG FFDVQETATA VETVGDLGQK FDLIGEKIDK QPCNIFSRVL  120
QISPAGPNAW GLSPTAIKPS PSMPGGMVKL GEGLVGGAAD SMAGMQISPP HSSGIKRRKN  180
QAKKVVCIPA PAAANGRPNG EVVPSDLWAW RKYGQKPIKG SPYPRGYYRC SSSKGCSARK  240
QVERSRTDPN MLVITYTSEH NHPWPTQRNA LAGSTRSQTT KSSYSGSNSS PRSQKQSQAL  300
KEATDSTSSS NINPPAKEEV VENEKPIDAA EYDEFDTISH RGYNPMISES SHSDDFFADL  360
AELEPDPMSL IFSKELSEAK PDEERGDNAM DPFDMFGWAR D*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A3e-172032651374WRKY transcription factor 1
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00171DAPTransfer from AT1G30650Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008788702.11e-160PREDICTED: probable WRKY transcription factor 14
TrEMBLK3YBZ11e-112K3YBZ1_SETIT; Uncharacterized protein
STRINGSi011735m1e-112(Setaria italica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP25923888
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G30650.13e-78WRKY DNA-binding protein 14